Dr Buddhapriya Chakrabarti

All publications

Journal articles

• Patel MK, Chakrabarti B & Panwar AS (2024) Sequence-agnostic FG-Nups showed emergence of selectivity and specificity in a coarse-grained model of the nuclear pore complex. Biophysical Journal, 123(3), 322a-322a.
• Biswas S, Mukherjee B & Chakrabarti B (2022) Thermodynamics predicts a stable microdroplet phase in polymer–gel mixtures undergoing elastic phase separation. Soft Matter, 18(42), 8117-8123.
• Mukherjee B & Chakrabarti B (2022) Wetting Behavior of a Three-Phase System in Contact with a Surface. Macromolecules.
• Taylor AIP, Gahan LD, Chakrabarti B & Staniforth R (2020) A two-step biopolymer nucleation model shows a nonequilibrium critical point. Journal of Chemical Physics, 153(2). View this article in WRRO
• Maji A, Ahmed JA, Roy S, Chakrabarti B & Mitra MK (2020) A Lamin-Associated Chromatin Model for Chromosome Organization. Biophysical Journal, 118(12), 3041-3050.
• Pasquina-Lemonche L, Burns J, Turner RD, Kumar S, Tank R, Mullin N, Wilson JS, Chakrabarti B, Bullough PA, Foster SJ & Hobbs JK (2020) The architecture of the Gram-positive bacterial cell wall. Nature. View this article in WRRO
• Kaity B, Sarkar R, Chakrabarti B & Mitra MK (2020) The Effect of Time-Dependent Drive and Delayed Feedback Loop in Two-Dimensional Gene Regulatory Network. Biophysical Journal, 118(3), 286a-286a.
• Mandal R, Chakrabarti B, Chakraborty D & Dasgupta C (2020) Complex dynamics of a sheared nematic fluid. Journal of Physics: Condensed Matter, 32(13), 134002-134002.
• Guiselin B, Law JO, Chakrabarti B & Kusumaatmaja H (2018) Dynamic Morphologies and Stability of Droplet Interface Bilayers. Physical Review Letters, 120(23). View this article in WRRO
• Kaity B, Sarkar R, Chakrabarti B & Mitra MK (2018) Reprogramming, oscillations and transdifferentiation in epigenetic landscapes. Scientific Reports, 8(1). View this article in WRRO
• Jones ML, Huang DM, Chakrabarti B & Groves C (2017) Correction to “Relating Molecular Morphology to Charge Mobility in Semicrystalline Conjugated Polymers”. The Journal of Physical Chemistry C, 121(22), 12504-12504.
• Alageshan JK, Chakrabarti B & Hatwalne Y (2017) Elasticity of smectic liquid crystals with in-plane orientational order and dispiration asymmetry. Physical Review E, 95(2). View this article in WRRO
• Krawczyk J, Croce S, McLeish TCB & Chakrabarti B (2016) Elasticity Dominated Surface Segregation of Small Molecules in Polymer Mixtures. Physical Review Letters, 116(20).
• Jones ML, Huang DM, Chakrabarti B & Groves C (2016) Relating Molecular Morphology to Charge Mobility in Semicrystalline Conjugated Polymers. The Journal of Physical Chemistry C, 120(8), 4240-4250.
• Prior C, Moussou J, Chakrabarti B, Jensen OE & Juel A (2016) Ribbon curling via stress relaxation in thin polymer films. Proceedings of the National Academy of Sciences, 113(7), 1719-1724.
• Mitra MK, Taylor PR, Hutchison CJ, McLeish TCB & Chakrabarti B (2014) Delayed self-regulation and time-dependent chemical drive leads to novel states in epigenetic landscapes. Interface, 11(100). View this article in WRRO
• Tapp D, Taylor JM, Lubansky AS, Bain CD & Chakrabarti B (2014) Theoretical analysis for the optical deformation of emulsion droplets. Optics Express, 22(4), 4523-4523.
• Jones ML, Chakrabarti B & Groves C (2014) Monte Carlo Simulation of Geminate Pair Recombination Dynamics in Organic Photovoltaic Devices: Multi-Exponential, Field-Dependent Kinetics and Its Interpretation. The Journal of Physical Chemistry C, 118(1), 85-91. View this article in WRRO
• Patel MK, Chakrabarti B & Panwar AS () Emergence of selectivity and specificity in a coarse-grained model of the nuclear pore complex with sequence-agnostic FG-Nups. Physical Chemistry Chemical Physics, 25(48), 32824-32836.
• Mukherjee B & Chakrabarti B () Gelation Impairs Phase Separation and Small Molecule Migration in Polymer Mixtures. Polymers, 12(7), 1576-1576.
• Kumar Alageshan J, Chakrabarti B & Hatwalne Y () Equilibrium of fluid membranes endowed with orientational order. Physical Review E, 95(4).

Conference proceedings papers

• Gahan LD, Taylor AIP, Chakrabarti BJ, Hawkins RJ & Staniforth RA (2021) Coarse grained simulations of amyloidogenic proteins in the context of Alzheimer's disease. EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, Vol. 50(SUPPL 1) (pp 123-123)
• Hargreaves A, Bull J, Chakrabarti B & Bain C (2017) Flow through oil nanothreads. Optical Trapping and Optical Micromanipulation XIV, 6 August 2017 - 10 August 2017.

Working papers

• Argungu M, Bayram S, Brook B, Chakrabarti B, Clayton RH, Daly DM, Dyson RJ, Holloway C, Manhas V, Naire S , Shearer T et al () Modelling afferent nerve responses to bladder filling.

Datasets

• Lemonche LP, Burns J, Turner R, Kumar S, Tank R, Mullin N, Wilson J, Chakrabarti B, Bullough P, Foster S & Hobbs J The architecture of the Gram-positive bacterial cell wall.

Preprints

• Patel MK, Chakrabarti B & Panwar AS (2023) Emergence of selectivity and specificity in a coarse-grained model of the nuclear pore complex with sequence-agnostic FG-Nups, Cold Spring Harbor Laboratory.
• Taylor AIP, Gahan LD, Staniforth RA & Chakrabarti B (2019) A Two-Step Biopolymer Nucleation Model Shows a Nonequilibrium Critical Point, arXiv.
• Biswas S & Chakrabarti B () Equilibrium morphologies of a macromolecule under soft confinement, Cold Spring Harbor Laboratory.
• Biswas S, Mukherjee B & Chakrabarti B () Thermodynamics of droplets undergoing liquid-liquid phase separation, Cold Spring Harbor Laboratory.
• Maji A, Ahmed J, Roy S, Chakrabarti B & Mitra MK () A Lamin Associated Chromatin Model for Chromosome Organization, Cold Spring Harbor Laboratory.
• Kaity B, Sarkar R, Chakrabarti B & Mitra MK () Reprogramming, oscillations and transdifferentiation in epigenetic landscapes, Cold Spring Harbor Laboratory.