Dr Vincent Cunliffe
School of Biosciences
Senior Lecturer in Developmental Genetics
+44 114 222 2389
Full contact details
School of Biosciences
D18d
Firth Court
Western Bank
Sheffield
S10 2TN
- Profile
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- 2007 - present: Senior Lecturer
- 2002 - 2007: Lecturer
- 1997 - 2002: Lister Institute Research Fellow, Department of Biomedical Science, University of Sheffield
- 1994 - 1997: Group Leader in Molecular and Cell Biology, Therexsys Ltd, Keele, UK
- 1991 - 1994: Postdoctoral Fellow, Division of Developmental Biology, National Institute for Medical Research, London, UK
- 1990: Postdoctoral Fellow, Postdoctoral Fellow, Department of Biochemistry, University of Washington, Seattle, USA
- 1986 - 1990: PhD, Imperial Cancer Research Fund and University College, London
- 1982 - 1986: BSc, University of Edinburgh
- Research interests
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Our research is focused primarily on understanding the roles of epigenetic mechanisms in the development and function of the zebrafish Central Nervous System (CNS), and how gene-environment interactions impact on these processes. In addition, we are exploiting the practical advantages of the zebrafish as a model organism to investigate the functions of genes implicated in human neurological disorders and cancer.
Integration of synaptic and neuroendocrine signalling and the role of the neural epigenome in health and disease
Epigenetic mechanisms regulate gene expression in response to a wide range of intercellular signals, conferring robustness to developmental processes and ensuring that there is a broad and reliable correspondence between genotype and phenotype. However, it is becoming apparent that epigenetic mechanisms also provide an experience-sensitive interface through which phenotypic plasticity is regulated in response to a wide range of environmental and behavioural signals across the lifecourse, and that these interactions can cause phenotypic changes that may be adaptive or maladaptive.
We aim to understand the roles of the epigenetic machinery, both in conferring developmental robustness and in mediating experience-sensitive phenotypic plasticity, within the zebrafish CNS. A particular focus is on understanding how experience-sensitive changes in synaptic activity and/or neuroendocrine signalling are integrated at the epigenomic level, and how the resulting changes in gene expression affect brain function.
We are collaborating with Dr Nils Krone to elucidate the impacts of altered steroid hormone signaling on zebrafish brain development and function, using novel mutants in which glucocorticoid synthesis and/or signalling is defective. We are also developing zebrafish models of nervous system disorders, such as epilepsy, by generating mutations in zebrafish orthologues of human epilepsy genes that are involved in synaptic vesicle formation and function. These models may be useful subjects of in vivo chemical screens to identify novel therapeutics for epilepsy and other disorders.
- Publications
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Show: Featured publications All publications
Featured publications
Journal articles
- Genetic disruption of 21-hydroxylase in zebrafish causes interrenal hyperplasia. Endocrinology, 158(12), 4165-4173. View this article in WRRO
- Disrupted-in-Schizophrenia-1 is essential for normal hypothalamic-pituitary-interrenal (HPI) axis function. Human Molecular Genetics, 26(11), 1992-2005. View this article in WRRO
- Epigenetic memory in response to environmental stressors.. FASEB J. View this article in WRRO
- The epigenetic impacts of social stress: how does social adversity become biologically embedded?. Epigenomics, 8(12), 1653-1669. View this article in WRRO
- Histone modifications in zebrafish development. Methods in Cell Biology, 135, 361-385. View this article in WRRO
- Building a zebrafish toolkit for investigating the pathobiology of epilepsy and identifying new treatments for epileptic seizures. Journal of Neuroscience Methods, 260, 91-95.
- Experience-sensitive epigenetic mechanisms, developmental plasticity, and the biological embedding of chronic disease risk. Wiley Interdisciplinary Reviews: Systems Biology and Medicine, 7(2), 53-71.
- The role of Sox6 in zebrafish muscle fiber type specification. Skeletal Muscle, 5(1), 2-2. View this article in WRRO
- Systems genetics identifies Sestrin 3 as a regulator of a proconvulsant gene network in human epileptic hippocampus. Nature Communications, 6. View this article in WRRO
- Epilepsy research methods update: Understanding the causes of epileptic seizures and identifying new treatments using non-mammalian model organisms. Seizure, 24, 44-51.
All publications
Journal articles
- Glucocorticoid Receptor regulates protein chaperone, circadian clock and affective disorder genes in the zebrafish brain.. Dis Model Mech.
- Interrenal development and function in zebrafish. Molecular and Cellular Endocrinology, 535, 111372-111372.
- A multiorganism pipeline for antiseizure drug discovery: Identification of chlorothymol as a novel γ‐aminobutyric acidergic anticonvulsant. Epilepsia.
- 11β-hydroxylase loss disrupts steroidogenesis and reproductive function in zebrafish. Journal of Endocrinology.
- The P450 side chain cleavage enzyme Cyp11a2 facilitates steroidogenesis in zebrafish. Journal of Endocrinology, 244(2), 309-321. View this article in WRRO
- Ferredoxin 1b deficiency leads to testis disorganization, impaired spermatogenesis and feminization in zebrafish.. Endocrinology. View this article in WRRO
- Increased EZH2 expression in prostate cancer is associated with metastatic recurrence following external beam radiotherapy. The Prostate, 79(10), 1079-1089. View this article in WRRO
- The effect of hyperglycemia on neurovascular coupling and cerebrovascular patterning in zebrafish. Journal of Cerebral Blood Flow and Metabolism. View this article in WRRO
- A Caenorhabditis elegans assay of seizure-like activity optimised for identifying antiepileptic drugs and their mechanisms of action. Journal of Neuroscience Methods, 309, 132-142. View this article in WRRO
- Imaging Neuronal Activity in the Optic Tectum of Late Stage Larval Zebrafish. Journal of Developmental Biology, 6(1). View this article in WRRO
- Epigenetics and primary care. British Journal of General Practice, 68(666), 8-9. View this article in WRRO
- Genetic disruption of 21-hydroxylase in zebrafish causes interrenal hyperplasia. Endocrinology, 158(12), 4165-4173. View this article in WRRO
- Biological Embedding of Psychosocial Stress Over the Life Course. Translational Epigenetics, 4, 251-270. View this article in WRRO
- Hedgehog signalling acts upstream of Laminin alpha1 transcription in the zebrafish paraxial mesoderm. Matrix Biology, 62, 58-74. View this article in WRRO
- Disrupted-in-Schizophrenia-1 is essential for normal hypothalamic-pituitary-interrenal (HPI) axis function. Human Molecular Genetics, 26(11), 1992-2005. View this article in WRRO
- Epigenetic memory in response to environmental stressors.. FASEB J. View this article in WRRO
- The epigenetic impacts of social stress: how does social adversity become biologically embedded?. Epigenomics, 8(12), 1653-1669. View this article in WRRO
- Histone modifications in zebrafish development. Methods in Cell Biology, 135, 361-385. View this article in WRRO
- Building a zebrafish toolkit for investigating the pathobiology of epilepsy and identifying new treatments for epileptic seizures. Journal of Neuroscience Methods, 260, 91-95.
- Sonic hedgehog functions upstream of disrupted-in-schizophrenia 1 (disc1): implications for mental illness. Biology Open, 4(10), 1336-1343. View this article in WRRO
- Experience-sensitive epigenetic mechanisms, developmental plasticity, and the biological embedding of chronic disease risk. Wiley Interdisciplinary Reviews: Systems Biology and Medicine, 7(2), 53-71.
- The role of Sox6 in zebrafish muscle fiber type specification. Skeletal Muscle, 5(1), 2-2. View this article in WRRO
- Systems genetics identifies Sestrin 3 as a regulator of a proconvulsant gene network in human epileptic hippocampus. Nature Communications, 6. View this article in WRRO
- Epilepsy research methods update: Understanding the causes of epileptic seizures and identifying new treatments using non-mammalian model organisms. Seizure, 24, 44-51.
- Identification of compounds with anti-convulsant properties in a zebrafish model of epileptic seizures.. Dis Model Mech, 5(6), 773-784. View this article in WRRO
- The epigenetic regulator Histone Deacetylase 1 promotes transcription of a core neurogenic programme in zebrafish embryos.. BMC Genomics, 12, 24. View this article in WRRO
- Opposing actions of histone deacetylase 1 and Notch signalling restrict expression of erm and fgf20a to hindbrain rhombomere centres during zebrafish neurogenesis.. Int J Dev Biol, 55(6), 597-602.
- Genetic and chemical modulation of spastin-dependent axon outgrowth in zebrafish embryos indicates a role for impaired microtubule dynamics in hereditary spastic paraplegia.. Dis Model Mech, 3(11-12), 743-751.
- Submillimeter-scale surface gradients of immobilized protein ligands.. Langmuir, 25(8), 4243-4246.
- Disrupted-in-schizophrenia 1 and neuregulin 1 are required for the specification of oligodendrocytes and neurones in the zebrafish brain.. Hum Mol Genet, 18(3), 391-404.
- A novel vertebrate model of Staphylococcus aureus infection reveals phagocyte-dependent resistance of zebrafish to non-host specialized pathogens.. Cell Microbiol, 10(11), 2312-2325.
- Eloquent silence: developmental functions of Class I histone deacetylases.. Curr Opin Genet Dev, 18(5), 404-410.
- The Polycomb Group protein EZH2 regulates actin polymerization in human prostate cancer cells.. Prostate, 68(3), 255-263.
- EZH2 promotes proliferation and invasiveness of prostate cancer cells.. Prostate, 67(5), 547-556.
- The polycomb group protein EZH2 is required for transcriptional repression of p21 and MMP7 in prostate cancer cells. EUR UROL SUPPL, 6(2), 131-131.
- The microtubule-severing protein Spastin is essential for axon outgrowth in the zebrafish embryo.. Hum Mol Genet, 15(18), 2763-2771.
- Histone deacetylase 1 is essential for oligodendrocyte specification in the zebrafish CNS.. Mech Dev, 123(1), 24-30.
- Foxn1 is required for tissue assembly and desmosomal cadherin expression in the hair shaft.. Dev Dyn, 232(4), 1062-1068.
- Histone deacetylase 1 is required to repress Notch target gene expression during zebrafish neurogenesis and to maintain the production of motoneurones in response to hedgehog signalling.. Development, 131(12), 2983-2995.
- Zebrafish: A Practical Approach. Edited by C. NÜSSLEIN-VOLHARD and R. DAHM. Oxford University Press. 2002. 322 pages. ISBN 0 19 963808 X. Price £40.00 (paperback). ISBN 0 19 963809 8. Price £80.00 (hardback).. Genetical Research, 82(1), 79-79.
- Memory by modification: the influence of chromatin structure on gene expression during vertebrate development.. Gene, 305(2), 141-150.
- Identification of putative interaction partners for the Xenopus Polycomb-group protein Xeed.. Gene, 291(1-2), 95-104.
- Complete rescue of the nude mutant phenotype by a wild-type Foxn1 transgene.. Mamm Genome, 13(5), 245-252.
- Functional studies of the Xenopus Polycomb-group proteins Xeed and XEz.. DEV BIOL, 235(1), 262-263.
- Epigenetic inheritance of coat colour. Trends in Genetics, 16(3), 116-116.
- Why snakes don't have legs. Trends in Genetics, 15(8), 306-306.
- Switching on the notochord.. Genes Dev, 13(13), 1643-1646.
- Inhibition of Tat-mediated transactivation and HIV replication with Tat mutant and repressor domain fusion proteins. Gene Therapy, 5(7), 946-954.
- Erratum: The Xenopus Brachyury promoter is activated by FGF and low concentrations of activin and suppressed by high concentrations of activin and by paired-type homeodomain proteins (Genes and Development (1997) 11 (3265-3276)). Genes and Development, 12(8), 1240.
- The Xenopus Brachyury promoter is activated by FGF and low concentrations of activin and suppressed by high concentrations of activin and by paired-type homeodomain proteins (vol 11, pg 3265, 1997). GENES & DEVELOPMENT, 12(8), 1240-1240.
- Regulation of the frog brachyury promoter by activin and FGF. FASEB Journal, 11(9).
- The Xenopus Brachyury promoter is activated by FGF and low concentrations ofactivinandsuppressed by high concentrationsof activin and by paired-type homeodomain proteins. Genes & Development, 11(23), 3265-3276.
- Innovative approaches to gene therapy. Current Opinion in Biotechnology, 6(6), 709-713.
- Patterning of the mesoderm in Xenopus: Dose-dependent and synergistic effects of Brachyury and Pintallavis. Development, 121(5), 1351-1359.
- Xenopus Brachyury. Seminars in Developmental Biology, 6(6), 405-410.
- Specification of mesodermal pattern in Xenopus laevis by interactions between Brachyury, noggin and Xwnt-8.. The EMBO Journal, 13(2), 349-359.
- Intercellular signalling in mesoderm formation during amphibian development. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 340(1293), 287-296.
- Ectopic mesoderm formation in Xenopus embryos caused by widespread expression of a Brachyury homologue. Nature, 358(6385), 427-430.
- A mouse zinc finger gene which is transiently expressed during spermatogenesis.. The EMBO Journal, 9(1), 197-205.
- Genomic analysis of a mouse zinc finger gene, Zfp-35, that is up-regulated during spermatogenesis. Genomics, 8(2), 331-339.
- The molecular genetics of human chromosome 6.. Journal of Medical Genetics, 24(11), 649-658.
- Social and asocial learning in zebrafish are encoded by a shared brain network that is differentially modulated by local activation. Communications Biology, 6(1).
- Analysis of the distal urinary tract in larval and adult zebrafish reveals homology to the human system. Disease Models & Mechanisms.
- Disrupted-in-Schizophrenia-1 is essential for normal hypothalamic-pituitary-interrenal (HPI) axis function. Yearbook of Paediatric Endocrinology.
- Bidirectional crosstalk between hypoxia-inducible factor and glucocorticoid signalling in zebrafish larvae. PLOS Genetics, 16(5). View this article in WRRO
Chapters
- C. elegans as a Potential Model for Acute Seizure-Like Activity, Neuromethods (pp. 233-248). Springer US
- List of Contributors, Epigenetics of Aging and Longevity (pp. xix-xxii). Elsevier
Conference proceedings papers
- Towards understanding the metabolic phenotype of glucocorticoid deficiency in 21-hydroxylase deficiency. HORMONE RESEARCH IN PAEDIATRICS, Vol. 95(SUPPL 2) (pp 79-79)
- The P450 side-chain cleavage isozyme cyp11a2 facilitates interrenal and gonadal steroid hormone biosynthesis in developing and adult zebrafish. HORMONE RESEARCH IN PAEDIATRICS, Vol. 91 (pp 66-67)
- Investigating the roles of androgens in male reproductive development, maintenance and function by characterisation of androgen and cortisol deficient 11 beta-hydroxylase mutant zebrafish lines. HORMONE RESEARCH IN PAEDIATRICS, Vol. 91 (pp 50-50)
- Glucocorticoid Deficiency Causes Differentially Dysregulated Oxidative Stress Depending on the Steroidogenic Defects. HORMONE RESEARCH IN PAEDIATRICS, Vol. 90 (pp 71-72)
- The Roles of Steroids in Gonadal Development and Maintenance - Insights from a Zebrafish Model of Androgen and Cortisol Deficiency. HORMONE RESEARCH IN PAEDIATRICS, Vol. 90 (pp 53-53)
- Neurodevelopmental functions of the epigenetic machinery in the zebrafish embryo: Histone Deacetylase 1 regulates transformation of neural progenitors into neurons and glia. DEVELOPMENTAL BIOLOGY, Vol. 331(2) (pp 408-408)
Preprints
- Analysis of the Distal Urinary Tract in Larval and Adult Zebrafish Reveals Unrecognized Homology to the Human System, Cold Spring Harbor Laboratory.
- Social and asocial learning in zebrafish are encoded by a shared brain network that is differentially modulated by local activation, Cold Spring Harbor Laboratory.
- Bidirectional crosstalk between Hypoxia-Inducible Factor and glucocorticoid signalling in zebrafish larvae, Cold Spring Harbor Laboratory.
- Grants
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Funding:
- MRC
- HEFCE
Collaborators:
- Marysia Placzek
- Penny Watt
- Joseph Harrity
- Val Gillet
- Richard Baines
- Enrico Petretto
- Teaching activities
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Undergraduate and postgraduate taught modules:
Undergraduate:
- BMS242/243 Cell & Molecular
- BMS334 Epigenetics (Coordinator)
- Level 3 Practical and Dissertation Modules
Masters (MSc):
- BMS6053 - Critical Analysis of Current Science
- Professional activities and memberships
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- Organizer, EMBO Practical Courses (1999, 2004, 2007, 2010)
- Postgraduate Certificate in Learning and Teaching, University of Sheffield (2007)
- Peer reviewer for scientific journals and grant-awarding bodies
- Invited speaker at international scientific meetings (European Zebrafish Meeting, International Meeting on Zebrafish Development and Genetics)
- Opportunities
We advertise PhD opportunities (Funded or Self-Funded) on FindAPhD.com
For further information and details of other projects on offer, please see the department PhD Opportunities page.