Dr Luke Green
School of Clinical Dentistry
Lecturer in Microbiology
+44 114 215 9547
Full contact details
School of Clinical Dentistry
Room LU105, L Floor
19 Claremont Crescent
Sheffield
S10 2TA
- Profile
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- 2025–present: Lecturer in Microbiology; University of Sheffield, UK
- 2021–2025: The Humane Research Trust Research Fellow; University of Sheffield, UK
- 2018–2021: Postdoctoral Associate; Prof. Pete Monk, University of Sheffield, UK
- 2015–2018: Postdoctoral Researcher; Dr. Chris Bayliss, University of Leicester, UK
- 2011–2015: Research Associate; Dr. Ingrid Scully Group, Pfizer Inc., USA
- 2006–2010: PhD; Prof. Rob Read Group, University of Sheffield, UK.
- Research interests
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Infectious disease is a huge health burden globally and antibiotic resistance is an ever growing problem, currently attributable to ~700,000 deaths per year with projected figures rising to 10 million by the year 2050. For this reason, new therapies to replace antibiotics are crucial. Due to their rapid doubling time, bacteria have the ability to quickly evolve mechanisms to overcome drugs targeted to them, for this reason, I believe the future for anti-infectives is to target infection at the human cell level. Bacteria enter our cells by "hijacking" parts of our own cell machinery (proteins).
Our cells are encased in a membrane consisting of water-repelling fatty acids and proteins. Bacteria have to attach to and breach this membrane in order to get inside our cells. They do this by "hijacking" the proteins within the membrane. Whilst there has been extensive research into how bacteria bind our cells, no universal mechanisms (used by all bacteria) are known. Different bacterial species have been shown to hijack different proteins, which causes problems with therapeutic design. I have discovered that a family of human cell membrane proteins, the tetraspanins, are extremely important in the binding of multiple bacterial species to our cells. Targeting tetraspanins using drugs reduces bacterial binding to multiple types of human cells by greater than 50%. The tetraspanins form part of our cell membranes and act as "organisers", bringing together lots of other proteins to form large protein "islands" in the cell membrane. Bacteria do not directly attach to the tetraspanins but I hypothesise that the tetraspanins organize the proteins required for bacterial binding and it is therefore the loss of this organization which results in reduced bacterial adhesion to our cells when the tetraspanins are blocked.
My lab is interested in investigating the role of these proteins and their interactors in bacterial infection.
- Publications
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Show: Featured publications All publications
Featured publications
Journal articles
- Tetraspanin CD9-derived peptides inhibit Pseudomonas aeruginosa corneal infection and aid in wound healing of corneal epithelial cells. The Ocular Surface, 32, 211-218.
- CD9 co-operation with syndecan-1 is required for a major staphylococcal adhesion pathway. mBio, e0148223.
- Meningococcal core and accessory phasomes vary by clonal complex. Microbial Genomics, 6(5). View this article in WRRO
- Localized Hypermutation is the Major Driver of Meningococcal Genetic Variability during Persistent Asymptomatic Carriage. mBio, 11(2).
- Potentiation of Phase Variation in Multiple Outer-Membrane Proteins During Spread of the Hyperinvasive Neisseria meningitidis Serogroup W ST-11 Lineage. The Journal of Infectious Diseases, 220(7), 1109-1117.
- Phase Variation of NadA in Invasive Neisseria meningitidis Isolates Impacts on Coverage Estimates for 4C-MenB, a MenB Vaccine. Journal of Clinical Microbiology, 56(9).
- Limited Impact of Adolescent Meningococcal ACWY Vaccination on Neisseria meningitidis Serogroup W Carriage in University Students. The Journal of Infectious Diseases, 217(4), 608-616.
- Cooperative role for tetraspanins in adhesin-mediated attachment of bacterial species to human epithelial cells.. Infect Immun, 79(6), 2241-2249. View this article in WRRO
Preprints
- Dynamics of the CD9 interactome during bacterial infection of epithelial cells by proximity labelling proteomics, Cold Spring Harbor Laboratory.
All publications
Journal articles
- Tetraspanin CD9-derived peptides inhibit Pseudomonas aeruginosa corneal infection and aid in wound healing of corneal epithelial cells. The Ocular Surface, 32, 211-218.
- CD9 co-operation with syndecan-1 is required for a major staphylococcal adhesion pathway. mBio, e0148223.
- Investigation of hospital discharge cases and SARS-CoV-2 introduction into Lothian care homes. Journal of Hospital Infection, 135, 28-36.
- Variable disruption of epithelial monolayers by Neisseria meningitidis carriage isolates of the hypervirulent MenW cc11 and MenY cc23 lineages. Microbiology, 169(2). View this article in WRRO
- Recurrent SARS-CoV-2 mutations in immunodeficient patients. Virus Evolution, 8(2). View this article in WRRO
- SARS-CoV-2 lineage dynamics in England from September to November 2021: high diversity of Delta sub-lineages and increased transmissibility of AY.4.2. BMC Infectious Diseases, 22(1).
- Author Correction: SARS-CoV-2 evolution during treatment of chronic infection. Nature, 608(7922), E23-E23.
- Author Correction: Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies. Nature, 608(7922), E24-E24.
- Spatial growth rate of emerging SARS-CoV-2 lineages in England, September 2020–December 2021. Epidemiology and Infection, 150.
- Altered subgenomic RNA abundance provides unique insight into SARS-CoV-2 B.1.1.7/Alpha variant infections. Communications Biology, 5. View this article in WRRO
- Publisher Correction: Genomic reconstruction of the SARS CoV-2 epidemic in England. Nature, 606(7915), E18-E18.
- SARS-CoV-2 Testing in the Community: Testing Positive Samples with the TaqMan SARS-CoV-2 Mutation Panel To Find Variants in Real Time. Journal of Clinical Microbiology, 60(4).
- Tracking SARS-CoV-2 mutations and variants through the COG-UK-Mutation Explorer. Virus Evolution, 8(1), 1-14. View this article in WRRO
- Genomic assessment of quarantine measures to prevent SARS-CoV-2 importation and transmission. Nature Communications, 13(1). View this article in WRRO
- Neisseria gonorrhoeae physiology and pathogenesis. Advances in microbial physiology, 80, 35-83. View this article in WRRO
- Publisher Correction: Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves.. Nat Commun, 13(1), 1013.
- Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission. Nature Communications, 13(1). View this article in WRRO
- Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves. Nature Communications, 13(1). View this article in WRRO
- Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B.1.617.2) compared with alpha (B.1.1.7) variants of concern: a cohort study. The Lancet Infectious Diseases, 22(1), 35-42.
- Genomic reconstruction of the SARS-CoV-2 epidemic in England. Nature, 600(7889), 506-511. View this article in WRRO
- The impact of viral mutations on recognition by SARS-CoV-2 specific T cells. iScience, 24(11). View this article in WRRO
- Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic. Cell, 184(20), 5179-5188.e8.
- Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B.1.1.7. Cell Reports, 35(13), 109292-109292.
- ACE2-independent interaction of SARS-CoV-2 spike protein with human epithelial cells is inhibited by unfractionated heparin. Cells, 10(6). View this article in WRRO
- Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England. Nature, 593(7858), 266-269. View this article in WRRO
- Changes in symptomatology, reinfection, and transmissibility associated with the SARS-CoV-2 variant B.1.1.7: an ecological study. The Lancet Public Health, 6(5), e335-e345.
- Subgenomic RNA identification in SARS-CoV-2 genomic sequencing data. Genome Research. View this article in WRRO
- Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies. Nature, 593(7857), 136-141. View this article in WRRO
- SARS-CoV-2 evolution during treatment of chronic infection. Nature, 592(7853), 277-282. View this article in WRRO
- Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity. Cell, 184(5), 1171-1187.e20.
- Cryptic prophages within a Streptococcus pyogenes genotype emm4 lineage. Microbial Genomics, 7(1). View this article in WRRO
- Evaluating the Effects of SARS-CoV-2 Spike Mutation D614G on Transmissibility and Pathogenicity. Cell, 184(1), 64-75.e11.
- Corneal infection models : tools to investigate the role of biofilms in bacterial keratitis. Cells, 9(11). View this article in WRRO
- Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus. Cell, 182(4), 812-827.e19. View this article in WRRO
- Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020. Eurosurveillance, 25(32).
- An integrated national scale SARS-CoV-2 genomic surveillance network. The Lancet Microbe, 1(3), e99-e100. View this article in WRRO
- Meningococcal core and accessory phasomes vary by clonal complex. Microbial Genomics, 6(5). View this article in WRRO
- Localized Hypermutation is the Major Driver of Meningococcal Genetic Variability during Persistent Asymptomatic Carriage. mBio, 11(2).
- Potentiation of Phase Variation in Multiple Outer-Membrane Proteins During Spread of the Hyperinvasive Neisseria meningitidis Serogroup W ST-11 Lineage. The Journal of Infectious Diseases, 220(7), 1109-1117.
- Draft Whole-Genome Sequences of 10 Aeromonas Strains from Clinical and Environmental Sources. Microbiology Resource Announcements, 8(30). View this article in WRRO
- Phase variation of Opa proteins in hypervirulent serogroup W meningococcal isolates. Access Microbiology, 1(1A).
- PhasomeIt: an ‘omics’ approach to cataloguing the potential breadth of phase variation in the genus Campylobacter. Microbial Genomics, 4(11).
- Phase Variation of NadA in Invasive Neisseria meningitidis Isolates Impacts on Coverage Estimates for 4C-MenB, a MenB Vaccine. Journal of Clinical Microbiology, 56(9).
- Limited Impact of Adolescent Meningococcal ACWY Vaccination on Neisseria meningitidis Serogroup W Carriage in University Students. The Journal of Infectious Diseases, 217(4), 608-616.
- Rise in Group W Meningococcal Carriage in University Students, United Kingdom. Emerging Infectious Diseases, 23(6), 1009-1011.
- Anti-infective vaccination in the 21st century—new horizons for personal and public health. Current Opinion in Microbiology, 27, 96-102.
- Cooperative role for tetraspanins in adhesin-mediated attachment of bacterial species to human epithelial cells.. Infect Immun, 79(6), 2241-2249. View this article in WRRO
- The SARS-CoV-2 Alpha variant was associated with increased clinical severity of COVID-19 in Scotland: A genomics-based retrospective cohort analysis. PLOS ONE, 18(4), e0284187-e0284187.
- Publisher Correction: SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway. Nature Microbiology, 7(10), 1709-1709.
- Genomic epidemiology of SARS-CoV-2 in a university outbreak setting and implications for public health planning. Scientific Reports, 12(1).
- SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway. Nature Microbiology, 7(8), 1161-1179.
- COVID-19 due to the B.1.617.2 (Delta) variant compared to B.1.1.7 (Alpha) variant of SARS-CoV-2: a prospective observational cohort study. Scientific Reports, 12(1).
- Rapid Transmission of a Hyper-Virulent Meningococcal Clone Due to High Effective Contact Numbers and Super Spreaders. Frontiers in Genetics, 11.
- Phasome analysis of pathogenic and commensal Neisseria species expands the known repertoire of phase variable genes, and highlights common adaptive strategies. PLOS ONE, 13(5), e0196675-e0196675.
- Clustered intergenic region sequences as predictors of factor H Binding Protein expression patterns and for assessing Neisseria meningitidis strain coverage by meningococcal vaccines. PLOS ONE, 13(5), e0197186-e0197186.
- periscope: sub-genomic RNA identification in SARS-CoV-2 Genomic Sequencing Data. View this article in WRRO
Chapters
- Determination of Repeat Number and Expression States of Phase-Variable Loci Through Next Generation Sequencing and Bioinformatic Analysis, Methods in Molecular Biology (pp. 83-92). Springer New York
- Approach to the Discovery, Development, and Evaluation of a Novel Neisseria meningitidis Serogroup B Vaccine, Vaccine Design (pp. 445-469). Springer New York
Preprints
- Dynamics of the CD9 interactome during bacterial infection of epithelial cells by proximity labelling proteomics, Cold Spring Harbor Laboratory.
- CD9 co-operation with syndecan-1 is required for a major staphylococcal adhesion pathway, Cold Spring Harbor Laboratory.
- Recurrent SARS-CoV-2 Mutations in Immunodeficient Patients, Cold Spring Harbor Laboratory.
- Spatial Growth Rate of Emerging SARS-CoV-2 Lineages in England, September 2020–December 2021, Cold Spring Harbor Laboratory.
- Lineage replacement and evolution captured by three years of the United Kingdom Covid Infection Survey, Cold Spring Harbor Laboratory.
- The hyper-transmissible SARS-CoV-2 Omicron variant exhibits significant antigenic change, vaccine escape and a switch in cell entry mechanism, Cold Spring Harbor Laboratory.
- Context-specific emergence and growth of the SARS-CoV-2 Delta variant, Cold Spring Harbor Laboratory.
- Genomics-informed outbreak investigations of SARS-CoV-2 using civet, Cold Spring Harbor Laboratory.
- Changes in symptomatology, re-infection and transmissibility associated with SARS-CoV-2 variant B.1.1.7: an ecological study, Cold Spring Harbor Laboratory.
- SARS-CoV-2 B.1.1.7 sensitivity to mRNA vaccine-elicited, convalescent and monoclonal antibodies, Cold Spring Harbor Laboratory.
- Early analysis of a potential link between viral load and the N501Y mutation in the SARS-COV-2 spike protein, Cold Spring Harbor Laboratory.
- Genomic epidemiology of the SARS-CoV-2 epidemic in Zimbabwe: Role of international travel and regional migration in spread, Cold Spring Harbor Laboratory.
- Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: Insights from linking epidemiological and genetic data, Cold Spring Harbor Laboratory.
- Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England, Cold Spring Harbor Laboratory.
- The circulating SARS-CoV-2 spike variant N439K maintains fitness while evading antibody-mediated immunity, Cold Spring Harbor Laboratory.
- MAJORA: Continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance, Cold Spring Harbor Laboratory.
- Altered Subgenomic RNA Expression in SARS-CoV-2 B.1.1.7 Infections, Cold Spring Harbor Laboratory.
- ACE2-independent interaction of SARS-CoV-2 spike protein to human epithelial cells can be inhibited by unfractionated heparin.
- Tetraspanin CD9-derived peptides inhibit Pseudomonas aeruginosa corneal infection and aid in wound healing of corneal epithelial cells. The Ocular Surface, 32, 211-218.
- Research group
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We are proud to consist of a global collection of postdoctoral researchers, PhD students and Master's/project students:
PDRA
Dr Isabel Fernandes Parreira - Investigating 3D models of sex-specific N. gonorrhoeae infection
PhD students
Miss Paige Wolverson - 'The effect of novel anti-infectives across the meningococcal infective pathway and in a 3D blood-brain barrier spheroid model'
Miss Anisha Dhanjal - 'Improving diagnostics of antimicrobial resistant N. gonorrhoeae using long-read sequencing'
Miss Luisa Carvalho - 'Determining the importance of LOS phase variation during sex-specific N. gonorrhoeae infection'
- Grants
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- The Humane Research Trust Research Fellowship.
- THRT PhD Scholarship.
- Opportunities
Postdoctoral funding
Enquiries are welcome from talented postdoctoral researchers interested in schemes such as the Newton Fellowships or Marie Curie Incoming fellowships at all times. Please contact Dr Luke Green for further information.
PhD projects
Enquiries from committed and talented prospective PhD students are welcome in all areas of our research portfolio. For further information contact Dr Luke Green for details. We welcome enquiries from funded overseas and home applicants.